Splicing Related Gene Database
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BLAST
Arabidopsis
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GeneModel
Gene Name
ID
HID
SRGD Group
Group ID
GB Accession
for
in
Any species
Human
Drosophila
Arabidopsis
Yeast
Arabidopsis
small nuclear RNA
Splicing related Proteins
Publications:
WB, 2004.
Arabidopsis U4 snRNAs
Gene
GeneID
Chr
str
From
To
len
eVal
Similarity
GenBank
atU4-6
At1g11886
1
-
4007020
4006867
154
1.00E-70
1 - 154, 96%
22293587
atU4-10
At1g35356
1
+
12987189
12987313
125
3.00E-34
1 - 124, 90%
atU4-4
At1g49242/49235
1
-
18222354
18222201
154
2.00E-75
1 - 154, 98%
22293588
atU4-11p
At1g68395
1
+
25647322
25647396
75
9.00E-07
18 - 37, 100%; 60 - 102, 90%
atU4-9
At1g79965
1
+
30086031
30086168
138
9.00E-47
18 - 154, 92%
atU4.2
At3g06900
3
-
2178343
2178190
154
2.00E-75
1 - 154, 98%
17674
atU4-5
At5g25776
5
-
8972618
8972465
154
1.00E-70
1 - 154, 96%
atU4-8
At5g26996
5
-
9494230
9494081
150
7.00E-66
1 - 150, 96%
atU4-7
At5g27766
5
+
9832934
9833083
150
7.00E-66
1 - 150, 96%
atU4.1
*
At5g49056
5
-
19902970
19902817
154
4.00E-80
1 - 154, 99%
17673
atU4.3p
At5g49526
5
-
20112072
20112030
43
2.00E-11
15 - 57, 95%
17675
*
used as query sequence.
