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resources for
Researchers
Researchers involved in plant genomics research have diverse interests: some are interested in learning about plant genomics efforts that are going on in other locales while others are more interested in acquiring protocols, ideas, or research outlines used by other groups. Listed below are various resources that will help you to find plant genomics information online as well as links to materials you can use as instructional resources for workers at various levels including undergraduates, technicians, coworkers, and administrators.
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| 96 Resource(s) Found |
1 - 10
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| SEARCH CRITERIA: All Resource Types; All Species; All Topics |
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1. Tomato Expression Database
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Program: Tomato Genome Project
Institution: Cornell University
Description: The Tomato Expression Database includes the tomato microarray data warehouse (TMD), tomato microarray expression data (TED) and tomato digital expression data. They were created and are maintained in the Giovannoni fruit ripening and nutritional genomics lab.
[ Map this location ] |
http://ted.bti.cornell.edu/
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2. Mesembryanthemum
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Program: Bohnert Lab
Institution: University of Illinois, Urbana-Champaign
Description: A genome sequence for Mesembryanthemum crystallinum would be of immense value for understanding the CAM pathway, the developmental peculiarities of the plant, and a number of morphological and molecular specialties that characterize many stress-tolerant species. From a standpoint of gene mining, we think that the plant has evolved not only stress-adapted versions of many proteins, but possibly also a number of novel paralogs of common genes for pathways that lead to stress tolerance. [ Map this location ] |
http://www.life.uiuc.edu/bohnert/projects/mesem.html
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3. The TIGR Soybean Gene Index (GmGI)
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Program: The TIGR Gene Index Project
Institution: TIGR (The Institute for Genomic Research)
Description: The TIGR Soybean Gene Index integrates research data from international Soybean EST sequencing and gene research projects. The ultimate goal of the TIGR Gene Index projects, including GmGI, is to represent a non-redundant view of all Soybean genes and data on their expression patterns, cellular roles, functions, and evolutionary relationships. [ Map this location ] |
http://www.tigr.org/tigr-scripts/tgi/T_index.cgi?species=soybean
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4. BarleyBase
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Program: USDA - United States Department of Agriculture
Institution: Iowa State University
Description: BarleyBase is a USDA-funded public repository for plant microarray data. Currently, BarleyBase houses EXP, DAT, CEL and CHP files from the 22K Affymetrix Barley1 and Arabidopsis GeneChips, along with experiment information. Also included are probe sets for grape, rice, soybean, wheat, and maize. [ Map this location ] |
http://www.barleybase.org/
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5. Apple EST Project
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Program: Apple Functional Genomics
Institution: University of Illinois, Urbana-Champaign
Description: The apple, Malus x domestica Borkh., is the most important deciduous tree fruit crop grown in the United States. This project will focus on developing genomic research tools and genome expression studies addressing flowering, fruiting, biotic and abiotic stress responses on a genome-wide scale. [ Map this location ] |
http://www.four-h.purdue.edu/apple_genomics/
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6. Gramene
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Program: N/A
Institution: Cold Spring Harbor Laboratory
Description: Gramene is a curated, open-source, Web-accessible data resource for comparative genome analysis in the grasses. As an information resource, Gramene's purpose is to provide added value to data sets available within the public sector to facilitate researchers' ability to leverage the rice genomic sequence to identify and understand corresponding genes, pathways and phenotypes in the crop grasses. [ Map this location ] |
http://www.gramene.org/
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7. Acorus americanus
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Program: The Floral Genome Project
Institution: Penn State University
Description: Acorus americanus webpage within the Floral Genome Project website. Descriptive information, photo, reason for sampling, FGP libraries and EST sequencing, bibliography and links. [ Map this location ] |
http://floralgenome.org/cgi-bin/fgpmine/www/taxa/taxon.cgi?id=4
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8. TIGR Barley Gene Index (HvGI)
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Program: The TIGR Gene Index Project
Institution: TIGR (The Institute for Genomic Research)
Description: The TIGR Barley Gene Index integrates research data from international Barley EST sequencing and gene research projects. The ultimate goal of the TIGR Gene Index projects, including HvGI, is to represent a non-redundant view of all Barley genes and data on their expression patterns, cellular roles, functions, and evolutionary relationships. [ Map this location ] |
http://www.tigr.org/tdb/tgi/hvgi/GenInfo.html
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9. The TIGR Triticum aestivum Gene Index (TaGI)
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Program: The TIGR Gene Index Project
Institution: TIGR (The Institute for Genomic Research)
Description: The TIGR T. aestivum Gene Index integrates research data from international T. aestivum EST sequencing and gene research projects. The ultimate goal of the TIGR Gene Index projects, including TaGI, is to represent a non-redundant view of all T. aestivum genes and data on their expression patterns, cellular roles, functions, and evolutionary relationships. [ Map this location ] |
http://www.tigr.org/tigr-scripts/tgi/T_index.cgi?species=wheat
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10. Oryza sativa (rice) genome view
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Program: NCBI Map Viewer
Institution: NCBI (National Center for Biotechnology Information)
Description: The Map Viewer supports search and display of Oryza sativa genomic information by chromosomal position. The data are from five sources, the Rice Genome Project, RiceGenes, Gramene, Oryzabase and the ACWW Consortium. [ Map this location ] |
http://www.ncbi.nlm.nih.gov/mapview/map_search.cgi?taxid=4530
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