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RcGDB Annotated Protein Alignments

This table organizes splice-aligned proteins and their functional annotations, in linear order according to their start/end coordinates on a genomic segment. These alignments do not necessarily represent functional genes, and some genes will lack protein alignments. The search examples demonstrate how to search by Scaffold/BAC ID, Protein ID, or keyword. Click a Scaffold/BAC ID, Protein ID, Description, or Date to filter results according to that value. Click the GDB icon in column 1 to open a new window displaying the corresponding genomic region in Genome Context View. For more information, visit PlantGDB Help.

           
(search examples: 27553; AT2G37270.1; Triacylglycerol Lip*) [ Export search result ] [ << Prev ][ Next >> ] (Showing 1 - 7 of 7 records / 1 BACs/Scaffolds)
GDB CoGe Scaffold/BAC ID Splice-Aligned Protein ID Start position End position Description Date
GDB CoGe Scaffold/BAC ID Splice-Aligned Protein ID Start position End position Description Date

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27553 n/a
Genome Context View View with CoGe 27553 Medtr6g013670.1 106102 106299 Ribosomal protein S28e; Nucleic acid-binding, OB-fold, subgroup chr06_pseudomolecule_IMGAG_V3 2964789-2966426 2010-11-05
Genome Context View View with CoGe 27553 AT3G10090.1 106102 106299 40S ribosomal protein S28 (RPS28A) | chr3:3108960-3109154 REVERSE 2010-11-05
Genome Context View View with CoGe 27553 AT5G03850.1 106102 106299 40S ribosomal protein S28 (RPS28B) | chr5:1028542-1028736 REVERSE 2010-11-05
Genome Context View View with CoGe 27553 AT5G64140.1 106102 106299 RPS28 (RIBOSOMAL PROTEIN S28); structural constituent of ribosome | chr5:25667529-25667723 REVERSE 2010-11-05
Genome Context View View with CoGe 27553 AC235488_12.1 115541 116448 Ribosomal protein S7 AC235488.1 52998-48408 E EGN_Mt090430 20090702 2010-11-05
Genome Context View View with CoGe 27553 AT3G11940.1 115618 116448 ATRPS5A (RIBOSOMAL PROTEIN 5A); structural constituent of ribosome | chr3:3778175-3779354 REVERSE 2010-11-05
Genome Context View View with CoGe 27553 AT2G37270.1 115618 116448 ATRPS5B (RIBOSOMAL PROTEIN 5B); structural constituent of ribosome | chr2:15647883-15649042 REVERSE 2010-11-05

Database lookup time: 0.059501171112061 sec

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