PlantGDB-assembled Unique Transcript (PUT) Assembly Data  ?

Don't see your favorite species here? Request a custom assembly.

Plant Species GenBank EST + cDNA PlantGDB assembly (detail)
Total available Currently assembled Total # of PUTs Date Version
Actinidia chinensis47,44847,41018,7342008-09-11167a
Actinidia deliciosa57,88057,81824,9812008-09-11167a
Actinidia eriantha12,66512,6555,2822008-09-11167a
Adiantum capillus-veneris (maidenhair fern)30,56130,49016,9442009-06-11171a
Agrostis stolonifera13,68613,6859,0392009-09-24173a
Allium cepa (onion)20,27120,25112,9902007-08-31161a
Alnus glutinosa32,56232,56212,4832012-01-30187a
Amborella trichopoda26,40326,39515,7722008-05-5165a
Antirrhinum majus (snapdragon)25,45225,07013,8012007-01-10157a
Aquilegia formosa x Aquilegia pubescens85,04085,04019,6152007-01-10157a
Arabidopsis thaliana (thale cress)1,607,8521,567,359543,4502009-01-18169a
Arachis duranensis116,409116,11062,7652011-01-12181a
Arachis hypogaea188,78685,61430,3912009-06-11171a
Arachis ipaensis32,79032,79019,2012010-10-25179a
Aristolochia fimbriata16,45416,4517,9672008-05-5165a
Artemisia annua360,456360,569154,6742011-04-22183a
Avena barbata54,24254,24221,3602009-09-24173a
Avena sativa (oat)25,44125,42313,4992009-09-21173a
Barnadesia spinosa28,48428,48321,8112009-01-8169a
Beta vulgaris (beet)27,06125,88318,0092007-01-15157a
Betula platyphylla44,17544,17542,0792012-01-30187a
Botryococcus braunii151,404151,40069,5552012-02-2187a
Brachypodium distachyon128,107128,09830,9912010-01-13175a
Brassica napus (rape)644,998632,919145,0022009-09-29173a
Brassica oleracea26,96526,92512,8432008-01-30163a
Brassica oleracea var. acephala119,238119,22542,9052011-01-13181a
Brassica oleracea var. alboglabra30,78730,76713,5132007-06-15159a
Brassica rapa (field mustard)45,034183,60044,9982009-06-11171a
Bruguiera gymnorhiza (burma mangrove)20,58422,50013,3322010-01-13175a
Cajanus cajan90,67690,32558,5662011-04-23183a
Camellia sinensis86,37784,96680,0872011-04-23183a
Cannabis sativa46,1373,7602,6712010-05-25177a
Capsicum annuum (chilli pepper)118,719117,09632,3362009-06-12171a
Carica papaya77,54477,25542,1692008-09-11167a
Carthamus tinctorius41,61141,01622,4282007-06-15159a
Casuarina glauca34,72034,71113,9692012-01-30187a
Catharanthus roseus20,55420,4609,6752008-05-5165a
Cenchrus ciliaris21,75121,73712,3642008-05-5165a
Centaurea maculosa44,88744,62028,5062007-09-2161a
Centaurea solstitialis40,40740,40726,4962009-01-13169a
Ceratopteris richardii5,1865,1784,2342007-01-16157a
Chlamydomonas reinhardtii204,827202,67650,3802008-01-30163a
Chlorella variabilis23,83223,8318,1272011-01-13181a
Cicer arietinum42,38340,62117,5402011-01-13181a
Cichorium endivia30,17230,17121,6032007-06-15159a
Cichorium intybus54,02254,01832,6172009-06-10171a
Citrullus lanatus11,87111,8676,1192011-04-23183a
Citrus aurantium14,58813,66811,4272008-09-11167a
Citrus clementina118,381118,35339,4682009-06-10171a
Citrus limonia11,04511,0459,8572009-09-25173a
Citrus reticulata55,98755,32446,8762008-09-11167a
Citrus sinensis (sweet orange)214,067203,890105,2942008-09-12167a
Citrus trifoliata62,79362,34435,1302009-09-24173a
Citrus unshiu19,16419,13910,4892009-01-8169a
Coccomyxa subellipsoidea C-16928,32328,3238,7482012-01-30187a
Coffea arabica (arabica coffee)174,493174,48849,6312011-04-23183a
Coffea canephora (robusta coffee)69,26669,16825,8312011-04-23183a
Coffea racemosa10,83810,8386,5402011-04-23183a
Cryptomeria japonica57,72056,70324,2992008-09-13167a
Cucumis melo100,595100,58417,4522011-04-23183a
Cucumis melo subsp. melo22,68322,68313,6922008-01-25163a
Cucumis sativus8,7068,4635,7992010-01-15175a
Curcuma longa12,60812,5936,6272007-01-16157a
Cyamopsis tetragonoloba16,48216,4817,6182007-01-16157a
Cycas rumphii22,00021,75710,9012008-01-25163a
Cynara cardunculus var. scolymus36,34036,33320,9152010-10-25179a
Cynodon dactylon20,30320,03012,7822009-01-8169a
Dactylis glomerata65,67265,66724,6142011-04-23183a
Daucus carota subsp. sativus18,06918,0698,9132012-01-30187a
Dianthus superbus12,30712,30711,8512012-01-30187a
Dioscorea alata44,13844,12228,0032011-01-13181a
Elaeis guineensis41,15337,59420,8742009-06-10171a
Eleusine coracana1,4451,3411,1202011-01-12181a
Elymus wawawaiensis/Elymus lanceolatus mixed EST library17,68917,6898,7822009-01-8169a
Eragrostis curvula12,29512,29510,9482008-05-5165a
Eschscholzia californica11,04611,0407,5462010-05-25177a
Eucalyptus globulus11,37811,3727,1062010-10-25179a
Eucalyptus grandis43,11542,62320,7642012-01-30187a
Eucalyptus gunnii19,85419,8198,1712008-05-6165a
Euonymus alatus51,38351,38112,2792011-01-13181a
Euphorbia esula (leafy spurge)47,59347,58327,9942007-01-16157a
Fagus sylvatica31,42031,41613,5442011-01-13181a
Festuca arundinacea (tall fescue)63,79863,79332,6502010-01-14175a
Festuca pratensis74,13074,12436,0072009-09-24173a
Fragaria vesca44,94442,74811,5272008-01-30163a
Fragaria x ananassa11,30511,1589,3912010-05-25177a
Fraxinus excelsior12,09112,0896,6752011-01-13181a
Gerbera hybrid cultivar17,05017,0409,6602009-06-10171a
Ginkgo biloba21,70921,33310,2102009-01-14169a
Glycine max (soybean)1,479,1091,379,625259,8492009-01-15169a
Glycine soja (wild soybean)18,55218,52311,3322007-01-17157a
Glycyrrhiza uralensis50,72450,67412,0202009-09-25173a
Gnetum gnemon10,75610,4306,1932008-01-25163a
Gossypium arboreum (tree cotton)41,83339,26124,5972007-01-23157a
Gossypium barbadense11,59211,5786,7122011-04-23183a
Gossypium hirsutum (upland cotton)275,437266,57998,4202008-05-8165a
Gossypium raimondii63,58663,58327,3552007-01-23157a
Guizotia abyssinica25,71125,71120,5792009-01-12169a
Helianthus annuus (common sunflower)111,417134,02461,1752009-01-14169a
Helianthus argophyllus35,72234,65520,5112007-01-24157a
Helianthus ciliaris21,59021,59016,3532007-06-15159a
Helianthus exilis33,96232,82721,7762007-01-24157a
Helianthus paradoxus30,51730,51720,6452007-06-15159a
Helianthus petiolaris27,48427,48414,8852007-01-24157a
Helianthus tuberosus40,39740,39425,7082007-06-15159a
Hevea brasiliensis37,18612,6984,8962010-10-25179a
Hordeum vulgare (barley)86,794531,159134,4822009-01-17169a
Humulus lupulus25,55725,5169,7892008-12-2168a
Ipomoea batatas23,71122,61012,4642009-01-14169a
Ipomoea nil (Japanese morning glory)62,47262,36922,9462007-01-24157a
Jatropha curcas59,71455,58527,7412011-05-2183a
Juglans hindsii x Juglans regia13,55912,7947,7532007-06-15159a
Lactuca perennis29,12629,12512,7472007-01-24157a
Lactuca saligna30,70430,69612,1862007-01-24157a
Lactuca sativa (garden lettuce)133,326133,32556,0132012-02-2187a
Lactuca serriola122,224122,22474,0682012-02-3187a
Lactuca virosa30,07430,06812,8392007-01-24157a
Lens culinaris24,82824,82816,2792012-01-30187a
Leymus cinereus x Leymus triticoides28,78728,78613,5672008-01-25163a
Limnanthes alba15,33215,3324,3592008-05-6165a
Linum usitatissimum289,279289,20747,2412011-05-2183a
Liriodendron tulipifera24,14624,14214,2322008-05-6165a
Lolium perenne17,97817,84710,9372010-10-25179a
Lotus japonicus246,320246,24956,5252010-05-26177a
Malus x domestica (apple)326,028324,76489,1582009-10-1173a
Manihot esculenta (cassava)80,75676,64930,4012008-05-7165a
Marchantia polymorpha (liverwort)33,76433,71710,9592007-01-24157a
Medicago sativa (alfalfa)26,62011,4016,1042008-01-30163a
Medicago sativa subsp. falcata18,06218,06217,3132012-01-31187a
Medicago truncatula (barrel medic)263,988264,18665,6282009-01-15169a
Mesembryanthemum crystallinum (common iceplant)27,56427,55311,3172007-01-24157a
Mesostigma viride16,03215,9407,3712007-01-25157a
Mimulus guttatus (spotted monkey flower)231,133231,01239,5772009-09-23173a
Mimulus guttatus var. nasutus30,81230,8129,4692010-01-14175a
Mimulus lewisii17,71817,7189,9502010-01-14175a
Musa ABB Group11,07911,0435,1672009-01-13169a
Musa acuminata5,6365,6444,5102010-01-15175a
Nicotiana benthamiana56,51356,34625,2972009-09-24173a
Nicotiana langsdorffii x Nicotiana sanderae12,54312,4996,7912007-01-25157a
Nicotiana sylvestris8,6918,6547,6122008-03-27163a
Nicotiana tabacum (common tobacco)338,261317,756131,9422009-09-24173a
Nuphar advena20,60120,59613,7892008-05-8165a
Ocimum basilicum23,28823,2538,9262007-01-25157a
Oryza longistaminata71,37171,37167,8482011-05-3183a
Oryza sativa (rice)63,17162,32844,6442008-03-13163a
Oryza sativa Indica Group215,321213,14292,9002009-06-10171a
Oryza sativa Japonica Group1,031,0741,015,010146,6422008-03-12163a
Ostreococcus lucimarinus CCE990117,59217,59213,9402007-08-31161a
Panax ginseng26,91126,84220,6212011-04-25183a
Panax quinquefolius5,0435,0403,8032010-05-26177a
Panicum virgatum (switchgrass)720,615546,260120,5242011-01-13181a
Papaver somniferum20,87820,38216,4862008-09-13167a
Parthenium argentatum11,74611,7468,5472010-05-25177a
Paullinia cupana var. sorbilis14,88814,88510,6722008-09-13167a
Persea americana16,62016,60310,9282008-05-6165a
Petunia axillaris26,38126,37725,7742011-04-25183a
Petunia axillaris subsp. axillaris11,09447,48519,6092009-09-25173a
Petunia integrifolia subsp. inflata27,99427,99427,3412011-04-25183a
Petunia x hybrida51,12651,10323,0642011-04-25183a
Phalaenopsis aphrodite204,771204,771194,9432012-01-31187a
Phaseolus acutifolius54,93854,92936,8272011-01-14181a
Phaseolus angustissimus10,27210,2723,4992008-05-6165a
Phaseolus coccineus391,165352,173221,9092011-04-25183a
Phaseolus vulgaris (kidney bean)117,261114,52630,2182011-01-14181a
Phyllostachys edulis15,17915,14111,7542011-04-25183a
Physalis peruviana33,87733,87726,6992012-01-31187a
Physcomitrella patens20,888382,89160,3952009-01-12169a
Picea abies14,61914,4788,7152010-01-14175a
Picea engelmannii x Picea glauca28,19028,17913,8802007-01-26157a
Picea glauca (white spruce)321,713321,19048,6192010-01-19175a
Picea sitchensis (Sitka spruce)206,402206,38831,2152011-04-25183a
Pinus banksiana36,38736,38713,0402010-05-25177a
Pinus contorta40,48941,13613,5702010-01-19175a
Pinus pinaster (cluster pine)35,13934,79215,6482010-05-25177a
Pinus sylvestris76,25676,24273,6092012-02-1187a
Pinus taeda (loblolly pine)329,066329,58472,8292007-01-26157a
Populus alba x Populus tremula var. glandulosa10,01910,0185,4302011-01-14181a
Populus deltoides14,75914,6638,1862008-01-25163a
Populus euphratica14,04113,9259,1172008-01-25163a
Populus nigra (black poplar)51,43551,39932,7182008-01-27163a
Populus tremula (European aspen)37,32437,31919,6332008-01-31163a
Populus tremula x Populus alba27,13627,03615,9462009-01-14169a
Populus tremula x Populus tremuloides76,28576,26735,1282007-01-27157a
Populus tremuloides (quaking aspen)12,91112,8655,7302007-01-27157a
Populus trichocarpa (western balsam poplar)94,42590,07929,6822007-01-27157a
Populus trichocarpa x Populus deltoides55,90255,22323,6862007-01-27157a
Populus trichocarpa x Populus nigra20,14220,1309,7402007-01-27157a
Populus x canadensis (Canadian poplar)10,24110,1944,9402007-01-27157a
Prosopis juliflora1,4781,4781,1252010-10-26179a
Prunus armeniaca (apricot)15,22915,1905,6372007-01-27157a
Prunus persica (peach)79,94179,24428,4752009-06-11171a
Pseudoroegneria spicata27,92127,89110,1682009-01-13169a
Pseudotsuga menziesii var. menziesii14,35414,3539,8572007-09-3161a
Punica granatum10,64310,6439,4842012-02-1187a
Quercus petraea58,23558,17823,7402010-05-25177a
Quercus robur81,68681,65929,9442011-01-14181a
Raphanus raphanistrum subsp. landra41,93541,93117,5642008-05-7165a
Raphanus raphanistrum subsp. maritimus40,66040,64917,3332008-05-7165a
Raphanus raphanistrum subsp. raphanistrum81,53081,50533,3692008-05-7165a
Raphanus sativus110,129110,10539,9522012-02-7187a
Raphanus sativus var. oleiformis40,32940,32019,3902009-09-24173a
Ricinus communis62,72557,77412,3822008-01-31163a
Saccharum hybrid cultivar (mixed)73,78873,78848,2952010-05-26177a
Saccharum hybrid cultivar CoS 76725,19025,19011,1532011-01-14181a
Saccharum hybrid cultivar SP70-114324,31924,31918,9632010-05-26177a
Saccharum hybrid cultivar SP80-3280135,573135,56981,8352010-05-26177a
Saccharum officinarum (sugarcane)363246,581131,3812007-01-27157a
Salvia miltiorrhiza (Chinese salvia)10,38210,3065,6242007-01-28157a
Saruma henryi10,28110,2776,7542007-01-28157a
Secale cereale (rye)9,4529,2645,9772007-01-28157a
Selaginella moellendorffii93,90093,82820,5422008-05-5165a
Sesamum indicum63,33863,33859,6112012-02-1187a
Silene dioica21,73721,73720,0462012-02-1187a
Silene latifolia55,36155,36139,7002012-02-2187a
Silene marizii13,87613,87613,5652012-02-2187a
Silene vulgaris11,24611,24611,0482012-02-2187a
Siraitia grosvenorii10,29810,2986,0642012-02-2187a
Solanum chacoense7,8267,8057,1102008-03-17163a
Solanum habrochaites26,07426,03912,0112010-01-21175a
Solanum lycopersicum314,062307,69656,8452009-06-11171a
Solanum melongena98,17498,16025,4432010-01-21175a
Solanum pennellii10,99110,9605,0082010-01-15175a
Solanum torvum28,75528,3849,1822010-01-15175a
Solanum tuberosum (potato)251,702251,21280,3442011-04-26183a
Sorghum bicolor (sorghum)210,084204,30644,9542007-01-28157a
Sorghum propinquum20,88220,8829,0612007-01-28157a
Striga hermonthica67,82167,82123,7472010-05-26177a
Syntrichia ruralis10,01010,0107,0872009-01-13169a
Tamarix hispida17,45117,4018,6162007-01-28157a
Taraxacum kok-saghyz16,44216,4396,9952010-05-26177a
Taraxacum officinale41,45941,45818,3332007-01-28157a
Theobroma cacao160,042148,87257,0352009-01-13169a
Trifolium pratense38,28738,27712,7462007-01-28157a
Triphysaria pusilla59,54959,54925,9472007-11-12162b
Triphysaria versicolor49,01449,01415,2552007-11-12162b
Triticum aestivum (bread wheat)1,147,1151,052,845301,7652008-04-15163b
Triticum durum19,81419,7358,5132012-02-2187a
Triticum monococcum (one-grained wheat)11,34311,2316,9872007-01-28157a
Tropaeolum majus10,52410,5184,6962009-01-13169a
Vaccinium corymbosum22,41522,25012,5262012-02-2187a
Vigna unguiculata187,654183,79934,7362008-09-13167a
Vitis shuttleworthii (calloose grape)10,70410,7045,9052007-01-28157a
Vitis vinifera (wine grape)467,657353,46064,7962009-01-14169a
Volvox carteri f. nagariensis132,099132,09620,6872008-05-6165a
Welwitschia mirabilis10,13710,1346,6062007-01-29157a
Wrightia tinctoria16,43316,4338,2702011-04-26183a
Zamia vazquezii11,49511,4957,6572008-05-6165a
Zea mays2,166,6331,293,797181,7172009-10-30171a
Zingiber officinale38,14838,10316,4952007-01-29157a
Zinnia violacea20,87920,70717,0112009-06-11171a
Zostera marina10,66510,6645,0892011-04-26183a

Loading Help Page...Thanks for your patience!

Loading Video...Thanks for your patience!

Loading Image...Thanks for your patience!